CDS

Accession Number TCMCG016C06646
gbkey CDS
Protein Id OMO91279.1
Location join(1252..1441,1827..2105,2189..2394,2658..2763,2951..3207,3412..3547,4281..4375,4464..4517,4861..4974,5767..5865,5987..6106,6654..6740,6860..7027)
Organism Corchorus capsularis
locus_tag CCACVL1_07170

Protein

Length 636aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01008339.1
Definition Reticulon [Corchorus capsularis]
Locus_tag CCACVL1_07170

EGGNOG-MAPPER Annotation

COG_category S
Description expressed protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01003        [VIEW IN KEGG]
KEGG_ko ko:K20784        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00514        [VIEW IN KEGG]
map00514        [VIEW IN KEGG]
GOs GO:0000271        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009664        [VIEW IN EMBL-EBI]
GO:0009832        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0010054        [VIEW IN EMBL-EBI]
GO:0010383        [VIEW IN EMBL-EBI]
GO:0010393        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016051        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016757        [VIEW IN EMBL-EBI]
GO:0016763        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033692        [VIEW IN EMBL-EBI]
GO:0034637        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042546        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0044036        [VIEW IN EMBL-EBI]
GO:0044038        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0045488        [VIEW IN EMBL-EBI]
GO:0045489        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048764        [VIEW IN EMBL-EBI]
GO:0048765        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0052325        [VIEW IN EMBL-EBI]
GO:0052546        [VIEW IN EMBL-EBI]
GO:0052636        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0070589        [VIEW IN EMBL-EBI]
GO:0070592        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080147        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCGGGTGGAGAAACGCTGTTCAAGAAGCTGCTGCTTCCAAACCGCTGTTTCTCACCATTTACGCCACCGTCATACTGGGTATTGTGGTGTCTTCCTTTTACGTTTTCTCCGCCATCTATTCTCCATCCGCTTCCGCCACTCAGTCTGTCTCTACTTCTTGGCTTTCTTCTCCTCCTCTCTCCCAAAATGGGGTTCCTATTGTAATTGGTCGGTCAATCAACATCTCTCAACCATCAACAGCAGCATCGCAACCTGGCAGCAACCAGTTGAGGCCTATTTGGGAGCCTCCACCTAGTAATTCAAAAATGCCACCTTTAAAGTCCTTCAGTCTAACAAAAGAGCTGGTGGGAGAAAGGGCTAAAGATAATGTGATTGTAGTCACCTTTGGTAACTTTGCGTTTATGGATTTCATACTGACTTGGGTTAAACATTTGACTGATCTTGGTGTTTCTAATCTTCTTGTCGGTGCTATGGATACCGAACTGTTGAAGGCTTTGTATTGGAAAGGTGTTCCTGTCTTTGATATGGGTAGTCATATGAGCACAATAGATGTTGGCTGGGGCTCTCCTACATTTCATAAAATGGGGAGAGAAAAAGTCATACTTATCAATGCTATACTTCCTTTTGGCTATGAGCTATTGATGTGCGATACAGACATGGTGTGGCTGAAGAATCCACTTCCATACCTTGCTCGGTACCCTGATGCAGATATCTTAACTTCAAGTGACCAAGTTACGCCAACCGTTGTTGATGACAGATTGGCTGACTGGAAACAAGTTGGTGCTTCATACAATATAGGAATTTTCCACTGGCGACCAACAGAGCCTGCAATGAAACTGGCAAAAGAATGGAAAGATATGCTTTTAGCTGATGATAAGATATGGGATCAAAATGGTTTCAATGAACTTGTACGTAGGCAGGTAGGGCCAGCAGTTGATAGTGATAGTGGACTTTTTTATGCTTATGATGGAAACCTCAAGGTGGGAGTTCTTCCAGAAAGTATATTTTGTAGTGGACACACTTACTTTGTTCAGGCAATGTATGAGCAGCTTAGGCTGGAGCCATATGCACTGCATACCACATTCCAATATGCTGGTACTGAGGGGAAGCGTCACCGACTGCGGGAGGCTATGGTTTTCTATGATCCACCAGAGTACTATGACGCACCAGGAGGATTCTTGTCATTTAAACCTTCTATTCCAAAGAGCTTGTTACTGGATGGGGAACATAATCTCGAATCACACTTCGCTCTTATTAATTACCAAATGAAACAGATTAGGTCGGCTCTTGCTATTGCTTCATTACTGAACCGTACACTGGTTATGCCTCCACTATGGTGCAGGTTGGATAGGATGTGGTTTCCACATCCTGGAGTTCTAGTGGGGTCAATGACTAGACAACCTTTTCTCTGCCCTTTGGATCATGTTTTTGAGGTAAATGTCATTTTGAAAAACCTTCCAGTGGAGGAATTCGGTCCTGCAATCAACATCAGAGAGTACTCCTTTCTCAGCAATCCATCATTGCCCCAACAAGTGAAAGACTCGTGGCTTGATGTTCAACTTTGTCAAGAAGGAACTGAAGATTGCCATGCATCTAGCAACACAAGTCGACCGGGTCTTTTAAGATTTCCAAAACGCAGCAGTGAAGAAACGTTCAAGACAGTATTCTCTTCATTCGAGGATGTCAAAGTCATTCAATTCTCTTCAATGCAAGATGCTTTTCTTGGTTTCTCCGACAAGACAAGAGAGGAGAAATTCAGGAACCGTGTGAAGCGATATGTAGGTATATGGTGCTGTGTTGACAGTCACGATCCTGGACACATATATTATGACATGTATTGGGATGAGAAACCAGATTGGAAACCTATCCCACCTCAAACCCCAGAGGATGATCATCCACCTTTCTGA
Protein:  
MGGWRNAVQEAAASKPLFLTIYATVILGIVVSSFYVFSAIYSPSASATQSVSTSWLSSPPLSQNGVPIVIGRSINISQPSTAASQPGSNQLRPIWEPPPSNSKMPPLKSFSLTKELVGERAKDNVIVVTFGNFAFMDFILTWVKHLTDLGVSNLLVGAMDTELLKALYWKGVPVFDMGSHMSTIDVGWGSPTFHKMGREKVILINAILPFGYELLMCDTDMVWLKNPLPYLARYPDADILTSSDQVTPTVVDDRLADWKQVGASYNIGIFHWRPTEPAMKLAKEWKDMLLADDKIWDQNGFNELVRRQVGPAVDSDSGLFYAYDGNLKVGVLPESIFCSGHTYFVQAMYEQLRLEPYALHTTFQYAGTEGKRHRLREAMVFYDPPEYYDAPGGFLSFKPSIPKSLLLDGEHNLESHFALINYQMKQIRSALAIASLLNRTLVMPPLWCRLDRMWFPHPGVLVGSMTRQPFLCPLDHVFEVNVILKNLPVEEFGPAINIREYSFLSNPSLPQQVKDSWLDVQLCQEGTEDCHASSNTSRPGLLRFPKRSSEETFKTVFSSFEDVKVIQFSSMQDAFLGFSDKTREEKFRNRVKRYVGIWCCVDSHDPGHIYYDMYWDEKPDWKPIPPQTPEDDHPPF